tidygenomics: Tidy Verbs for Dealing with Genomic Data Frames

Handle genomic data within data frames just as you would with 'GRanges'. This packages provides method to deal with genomic intervals the "tidy-way" which makes it simpler to integrate in the the general data munging process. The API is inspired by the popular 'bedtools' and the genome_join() method from the 'fuzzyjoin' package.

Version: 0.1.2
Imports: dplyr, rlang, purrr, tidyr, fuzzyjoin (≥ 0.1.3), IRanges, Rcpp
LinkingTo: Rcpp
Suggests: testthat, knitr, rmarkdown
Published: 2019-08-08
DOI: 10.32614/CRAN.package.tidygenomics
Author: Constantin Ahlmann-Eltze ORCID iD [aut, cre], Stan Developers [cph] (Code from the Stan Math library is reused in 'cluster_interval.cpp'), David Robinson [cph] (Code from the fuzzyjoin package is reused)
Maintainer: Constantin Ahlmann-Eltze <artjom31415 at googlemail.com>
License: GPL-3
URL: https://github.com/const-ae/tidygenomics
NeedsCompilation: yes
Materials: README NEWS
CRAN checks: tidygenomics results


Reference manual: tidygenomics.pdf
Vignettes: Tidy Genomics


Package source: tidygenomics_0.1.2.tar.gz
Windows binaries: r-devel: tidygenomics_0.1.2.zip, r-release: tidygenomics_0.1.2.zip, r-oldrel: tidygenomics_0.1.2.zip
macOS binaries: r-release (arm64): tidygenomics_0.1.2.tgz, r-oldrel (arm64): tidygenomics_0.1.2.tgz, r-release (x86_64): tidygenomics_0.1.2.tgz, r-oldrel (x86_64): tidygenomics_0.1.2.tgz
Old sources: tidygenomics archive


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