microseq: Basic Biological Sequence Handling

Basic functions for microbial sequence data analysis. The idea is to use generic R data structures as much as possible, making R data wrangling possible also for sequence data.

Version: 2.1.5
Depends: R (≥ 4.0.0), tibble, stringr, dplyr, data.table, rlang
Imports: Rcpp (≥ 0.12.0)
LinkingTo: Rcpp (≥ 0.12.0)
Published: 2021-10-30
Author: Lars Snipen, Kristian Hovde Liland
Maintainer: Lars Snipen <lars.snipen at nmbu.no>
License: GPL-2
NeedsCompilation: yes
CRAN checks: microseq results

Documentation:

Reference manual: microseq.pdf
Vignettes: The microseq package vignette

Downloads:

Package source: microseq_2.1.5.tar.gz
Windows binaries: r-devel: microseq_2.1.5.zip, r-devel-UCRT: microseq_2.1.5.zip, r-release: microseq_2.1.5.zip, r-oldrel: microseq_2.1.5.zip
macOS binaries: r-release (arm64): microseq_2.1.5.tgz, r-release (x86_64): microseq_2.1.5.tgz, r-oldrel: microseq_2.1.5.tgz
Old sources: microseq archive

Reverse dependencies:

Reverse depends: microclass, micropan
Reverse imports: microcontax

Linking:

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