ExomeDepth: Calls Copy Number Variants from Targeted Sequence Data

Calls copy number variants (CNVs) from targeted sequence data, typically exome sequencing experiments designed to identify the genetic basis of Mendelian disorders.

Version: 1.1.15
Depends: R (≥ 3.4.0)
Imports: Biostrings, IRanges, Rsamtools, GenomicRanges (≥ 1.23.0), aod, VGAM (≥ 0.8.4), methods, GenomicAlignments, dplyr, magrittr
Suggests: knitr
Published: 2020-01-09
Author: Vincent Plagnol [aut, cre]
Maintainer: Vincent Plagnol <v.plagnol at ucl.ac.uk>
License: GPL-3
NeedsCompilation: yes
CRAN checks: ExomeDepth results


Reference manual: ExomeDepth.pdf
Vignettes: ExomeDepth


Package source: ExomeDepth_1.1.15.tar.gz
Windows binaries: r-devel: ExomeDepth_1.1.15.zip, r-devel-UCRT: ExomeDepth_1.1.15.zip, r-release: ExomeDepth_1.1.15.zip, r-oldrel: ExomeDepth_1.1.15.zip
macOS binaries: r-release (arm64): ExomeDepth_1.1.15.tgz, r-release (x86_64): ExomeDepth_1.1.15.tgz, r-oldrel: ExomeDepth_1.1.15.tgz
Old sources: ExomeDepth archive


Please use the canonical form https://CRAN.R-project.org/package=ExomeDepth to link to this page.