CRAN Package Check Results for Package SpaDES.core

Last updated on 2024-07-12 15:53:01 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.1.0 60.25 585.19 645.44 NOTE
r-devel-linux-x86_64-debian-gcc 2.1.0 52.34 429.40 481.74 NOTE
r-devel-linux-x86_64-fedora-clang 2.1.0 733.27 NOTE
r-devel-linux-x86_64-fedora-gcc 2.1.0 773.12 NOTE
r-devel-windows-x86_64 2.1.0 57.00 405.00 462.00 NOTE
r-patched-linux-x86_64 2.1.0 64.51 564.94 629.45 NOTE
r-release-linux-x86_64 2.1.0 72.13 549.23 621.36 NOTE
r-release-macos-arm64 2.1.0 192.00 NOTE
r-release-macos-x86_64 2.1.0 406.00 NOTE
r-release-windows-x86_64 2.1.0 53.00 464.00 517.00 NOTE
r-oldrel-macos-arm64 2.1.0 228.00 ERROR
r-oldrel-macos-x86_64 2.1.0 395.00 ERROR
r-oldrel-windows-x86_64 2.1.0 71.00 709.00 780.00 NOTE

Additional issues

noSuggests

Check Details

Version: 2.1.0
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘NLMR’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2.1.0
Check: installed package size
Result: NOTE installed size is 6.7Mb sub-directories of 1Mb or more: R 5.0Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2.1.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: SpaDES.core-package.Rd: copy, equalExtent, getColors, divergentColors, layerNames, numLayers, Plot, clearPlot, clickValues, clickExtent, clickCoordinates, dev, newPlot, rePlot depsLoadOrder.Rd: igraph downloadData.Rd: prepInputs emptyEventList.Rd: data.table moduleDiagram.Rd: igraph moduleGraph.Rd: igraph simList-accessors-events.Rd: data.table simList-class.Rd: data.table Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavor: r-devel-windows-x86_64

Version: 2.1.0
Check: running R code from vignettes
Result: ERROR Errors in running code in vignettes: when running code in ‘ii-modules.Rmd’ ... restartSpades() The initial state of the last1events are cached and savedin the simList located at savedSimEnv()$.sim,as sim$.recoverableObjs, with the most recent eventthe first element in the list, 2nd most recent event = the second most recent event, etc. The objects contained in each of those are only the objects that may havechanged, according to the metadata for each module. To recover, use:cli-92167-1 Because of an interrupted spades call, the sim object at the start of the interrupted event was saved in SpaDES.core:::savedSimEnv()$.sim It will be deleted on next call to spades(). When sourcing ‘ii-modules.R’: Error: Package 'NLMR' not available. Please install it using: install.packages('NLMR', repos = 'https://predictiveecology.r-universe.dev') Execution halted when running code in ‘iii-cache.Rmd’ ... The initial state of the last1events are cached and savedin the simList located at savedSimEnv()$.sim,as sim$.recoverableObjs, with the most recent eventthe first element in the list, 2nd most recent event = the second most recent event, etc. The objects contained in each of those are only the objects that may havechanged, according to the metadata for each module. To recover, use:cli-92167-1 Because of an interrupted spades call, the sim object at the start of the interrupted event was saved in SpaDES.core:::savedSimEnv()$.sim It will be deleted on next call to spades(). Timing stopped at: 0.178 0.014 0.318 When sourcing ‘iii-cache.R’: Error: Package 'NLMR' not available. Please install it using: install.packages('NLMR', repos = 'https://predictiveecology.r-universe.dev') Execution halted ‘i-introduction.Rmd’ using ‘UTF-8’... [2s/3s] OK ‘ii-modules.Rmd’ using ‘UTF-8’... failed ‘iii-cache.Rmd’ using ‘UTF-8’... failed ‘iv-advanced.Rmd’ using ‘UTF-8’... [0s/0s] OK ‘v-automated-testing.Rmd’ using ‘UTF-8’... [0s/0s] OK Flavor: r-oldrel-macos-arm64

Version: 2.1.0
Check: running R code from vignettes
Result: ERROR Errors in running code in vignettes: when running code in ‘ii-modules.Rmd’ ... restartSpades() The initial state of the last1events are cached and savedin the simList located at savedSimEnv()$.sim,as sim$.recoverableObjs, with the most recent eventthe first element in the list, 2nd most recent event = the second most recent event, etc. The objects contained in each of those are only the objects that may havechanged, according to the metadata for each module. To recover, use:cli-98058-1 Because of an interrupted spades call, the sim object at the start of the interrupted event was saved in SpaDES.core:::savedSimEnv()$.sim It will be deleted on next call to spades(). When sourcing ‘ii-modules.R’: Error: Package 'NLMR' not available. Please install it using: install.packages('NLMR', repos = 'https://predictiveecology.r-universe.dev') Execution halted when running code in ‘iii-cache.Rmd’ ... The initial state of the last1events are cached and savedin the simList located at savedSimEnv()$.sim,as sim$.recoverableObjs, with the most recent eventthe first element in the list, 2nd most recent event = the second most recent event, etc. The objects contained in each of those are only the objects that may havechanged, according to the metadata for each module. To recover, use:cli-98058-1 Because of an interrupted spades call, the sim object at the start of the interrupted event was saved in SpaDES.core:::savedSimEnv()$.sim It will be deleted on next call to spades(). Timing stopped at: 0.336 0.034 0.559 When sourcing ‘iii-cache.R’: Error: Package 'NLMR' not available. Please install it using: install.packages('NLMR', repos = 'https://predictiveecology.r-universe.dev') Execution halted ‘i-introduction.Rmd’ using ‘UTF-8’... [4s/6s] OK ‘ii-modules.Rmd’ using ‘UTF-8’... failed ‘iii-cache.Rmd’ using ‘UTF-8’... failed ‘iv-advanced.Rmd’ using ‘UTF-8’... [0s/1s] OK ‘v-automated-testing.Rmd’ using ‘UTF-8’... [1s/1s] OK Flavor: r-oldrel-macos-x86_64