To cite EnrichIntersect in publications use:

Zhao Z, Zucknick M, Aittokallio T (2022). “EnrichIntersect: an R package for custom set enrichment analysis and interactive visualization of intersecting sets.” Bioinformatics Advances, 2(1), vbac073. doi:10.1093/bioadv/vbac073.

If mix-lasso is used, please also cite:

Zhao Z, Wang S, Zucknick M, Aittokallio T (2022). “Tissue-specific identification of multi-omics features for pan-cancer drug response prediction.” iScience, 25(8), 104767. doi:10.1016/j.isci.2022.104767.

Corresponding BibTeX entries:

  @Article{,
    title = {EnrichIntersect: an R package for custom set enrichment
      analysis and interactive visualization of intersecting sets},
    author = {Zhi Zhao and Manuela Zucknick and Tero Aittokallio},
    journal = {Bioinformatics Advances},
    year = {2022},
    volume = {2},
    number = {1},
    pages = {vbac073},
    doi = {10.1093/bioadv/vbac073},
  }
  @Article{,
    title = {Tissue-specific identification of multi-omics features for
      pan-cancer drug response prediction},
    author = {Zhi Zhao and Shixiong Wang and Manuela Zucknick and Tero
      Aittokallio},
    journal = {iScience},
    year = {2022},
    volume = {25},
    number = {8},
    pages = {104767},
    doi = {10.1016/j.isci.2022.104767},
  }