CNprep: Pre-Process DNA Copy Number (CN) Data for Detection of CN Events

DNA copy number data evaluation using both their initial form (copy number as a noisy function of genomic position) and their approximation by a piecewise-constant function (segmentation), for the purpose of identifying genomic regions where the copy number differs from the norm.

Version: 2.2
Depends: R (≥ 2.10), parallel, mclust, rlecuyer, stats
Published: 2022-05-24
DOI: 10.32614/CRAN.package.CNprep
Author: Alex Krasnitz, Guoli Sun
Maintainer: Guoli Sun <guolisun87 at>
License: GPL-2
NeedsCompilation: no
CRAN checks: CNprep results


Reference manual: CNprep.pdf


Package source: CNprep_2.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): CNprep_2.2.tgz, r-oldrel (arm64): CNprep_2.2.tgz, r-release (x86_64): CNprep_2.2.tgz, r-oldrel (x86_64): CNprep_2.2.tgz
Old sources: CNprep archive


Please use the canonical form to link to this page.