CRAN Package Check Results for Maintainer ‘Quentin F. Gronau <Quentin.F.Gronau at gmail.com>’

Last updated on 2020-09-22 16:03:10 CEST.

Package ERROR NOTE OK
abtest 12
bridgesampling 3 1 8

Package abtest

Current CRAN status: OK: 12

Package bridgesampling

Current CRAN status: ERROR: 3, NOTE: 1, OK: 8

Version: 1.0-0
Check: tests
Result: ERROR
     Running 'testthat.R' [117s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > Sys.setenv("R_TESTS" = "")
     > library(testthat)
     >
     > test_check("bridgesampling")
     Loading required package: bridgesampling
     Median of 10 bridge sampling estimates
     of the log marginal likelihood: 4293.156
     Range of estimates: 4290.976 to 4294.028
     Interquartile range: 1.62594
     Method: normal
     make cmd is
     make -f "D:/RCompile/recent/R/etc/x64/Makeconf" -f "D:/RCompile/recent/R/etc/x64/Makevars.site" -f "D:/RCompile/recent/R/share/make/winshlib.mk" CXX='$(CXX14) $(CXX14STD)' CXXFLAGS='$(CXX14FLAGS)' CXXPICFLAGS='$(CXX14PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX14LDFLAGS)' SHLIB_LD='$(SHLIB_CXX14LD)' SHLIB="file34a040ac2243.dll" WIN=64 TCLBIN=64 OBJECTS="file34a040ac2243.o"
    
     make would use
     make[1]: Entering directory '/d/temp/Rtmp2r7cjt'
     if test "zfile34a040ac2243.o" != "z"; then \
     if test -e "file34a040ac2243-win.def"; then \
     echo d:/Compiler/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o file34a040ac2243.dll file34a040ac2243-win.def file34a040ac2243.o -L"d:/Compiler/gcc-4.9.3/local330/lib/x64" -L"d:/Compiler/gcc-4.9.3/local330/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
     d:/Compiler/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o file34a040ac2243.dll file34a040ac2243-win.def file34a040ac2243.o -L"d:/Compiler/gcc-4.9.3/local330/lib/x64" -L"d:/Compiler/gcc-4.9.3/local330/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
     else \
     echo EXPORTS > tmp.def; \
     d:/Compiler/rtools40/mingw64/bin/nm file34a040ac2243.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
     echo d:/Compiler/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o file34a040ac2243.dll tmp.def file34a040ac2243.o -L"d:/Compiler/gcc-4.9.3/local330/lib/x64" -L"d:/Compiler/gcc-4.9.3/local330/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
     d:/Compiler/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o file34a040ac2243.dll tmp.def file34a040ac2243.o -L"d:/Compiler/gcc-4.9.3/local330/lib/x64" -L"d:/Compiler/gcc-4.9.3/local330/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
     rm -f tmp.def; \
     fi \
     fi
     make[1]: Leaving directory '/d/temp/Rtmp2r7cjt'
     -- 1. Error: stan_bridge_sampler (@test-stan_bridge_sampler_basic.R#56) -------
     D:/Compiler/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: file34a040ac2243.o:file34a040ac2243.cpp:(.text$_ZN3tbb8internal26task_scheduler_observer_v3D1Ev[_ZN3tbb8internal26task_scheduler_observer_v3D1Ev]+0x14): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'D:/Compiler/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: file34a040ac2243.o:file34a040ac2243.cpp:(.text$_ZN3tbb8internal26task_scheduler_observer_v3D0Ev[_ZN3tbb8internal26task_scheduler_observer_v3D0Ev]+0x1c): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'D:/Compiler/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: file34a040ac2243.o:file34a040ac2243.cpp:(.text$_ZN4stan4math16ad_tape_observerD1Ev[_ZN4stan4math16ad_tape_observerD1Ev]+0x15): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'D:/Compiler/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: file34a040ac2243.o:file34a040ac2243.cpp:(.text$_ZN4stan4math16ad_tape_observerD1Ev[_ZN4stan4math16ad_tape_observerD1Ev]+0x47): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'D:/Compiler/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: file34a040ac2243.o:file34a040ac2243.cpp:(.text$_ZN4stan4math16ad_tape_observerD0Ev[_ZN4stan4math16ad_tape_observerD0Ev]+0x15): more undefined references to `tbb::internal::task_scheduler_observer_v3::observe(bool)' followcollect2.exe: error: ld returned 1 exit status
     Backtrace:
     1. utils::capture.output(...)
     5. rstan::stan_model(model_code = stancodeH0, model_name = "stanmodel")
     6. rstan:::cxxfunctionplus(...)
     10. inline::cxxfunction(...)
     11. inline:::compileCode(f, code, language = language, verbose = verbose)
    
     -- 2. Error: stan_bridge_sampler (@test-stan_bridge_sampler_basic.R#56) -------
     invalid connection
     Backtrace:
     1. utils::capture.output(...)
     5. rstan::stan_model(model_code = stancodeH0, model_name = "stanmodel")
     6. rstan:::cxxfunctionplus(...)
     7. base::sink(type = "output")
    
     starting worker pid=127156 on localhost:11807 at 05:51:36.519
     starting worker pid=186992 on localhost:11807 at 05:51:36.846
    
     SAMPLING FOR MODEL 'continuous' NOW (CHAIN 1).
     Chain 1:
     Chain 1: Gradient evaluation took 0 seconds
     Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0 seconds.
     Chain 1: Adjust your expectations accordingly!
     Chain 1:
     Chain 1:
     Chain 1: Iteration: 1 / 5000 [ 0%] (Warmup)
     Chain 1: Iteration: 500 / 5000 [ 10%] (Warmup)
     Chain 1: Iteration: 1000 / 5000 [ 20%] (Warmup)
     Chain 1: Iteration: 1500 / 5000 [ 30%] (Warmup)
     Chain 1: Iteration: 2000 / 5000 [ 40%] (Warmup)
     Chain 1: Iteration: 2500 / 5000 [ 50%] (Warmup)
     Chain 1: Iteration: 2501 / 5000 [ 50%] (Sampling)
     Chain 1: Iteration: 3000 / 5000 [ 60%] (Sampling)
     Chain 1: Iteration: 3500 / 5000 [ 70%] (Sampling)
    
     SAMPLING FOR MODEL 'continuous' NOW (CHAIN 2).
     Chain 2:
     Chain 2: Gradient evaluation took 0 seconds
     Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0 seconds.
     Chain 2: Adjust your expectations accordingly!
     Chain 2:
     Chain 2:
     Chain 2: Iteration: 1 / 5000 [ 0%] (Warmup)
     Chain 1: Iteration: 4000 / 5000 [ 80%] (Sampling)
     Chain 2: Iteration: 500 / 5000 [ 10%] (Warmup)
     Chain 2: Iteration: 1000 / 5000 [ 20%] (Warmup)
     Chain 1: Iteration: 4500 / 5000 [ 90%] (Sampling)
     Chain 2: Iteration: 1500 / 5000 [ 30%] (Warmup)
     Chain 2: Iteration: 2000 / 5000 [ 40%] (Warmup)
     Chain 2: Iteration: 2500 / 5000 [ 50%] (Warmup)
     Chain 2: Iteration: 2501 / 5000 [ 50%] (Sampling)
     Chain 1: Iteration: 5000 / 5000 [100%] (Sampling)
     Chain 1:
     Chain 1: Elapsed Time: 0.483 seconds (Warm-up)
     Chain 1: 0.64 seconds (Sampling)
     Chain 1: 1.123 seconds (Total)
     Chain 1:
     Chain 2: Iteration: 3000 / 5000 [ 60%] (Sampling)
     Chain 2: Iteration: 3500 / 5000 [ 70%] (Sampling)
     Chain 2: Iteration: 4000 / 5000 [ 80%] (Sampling)
     Chain 2: Iteration: 4500 / 5000 [ 90%] (Sampling)
     Chain 2: Iteration: 5000 / 5000 [100%] (Sampling)
     Chain 2:
     Chain 2: Elapsed Time: 0.28 seconds (Warm-up)
     Chain 2: 0.468 seconds (Sampling)
     Chain 2: 0.748 seconds (Total)
     Chain 2:
     Iteration: 1
     Iteration: 2
     Iteration: 3
     Iteration: 4
     Iteration: 5
     starting worker pid=201724 on localhost:11807 at 05:51:51.132
     starting worker pid=14268 on localhost:11807 at 05:51:51.428
    
     SAMPLING FOR MODEL 'continuous' NOW (CHAIN 1).
     Chain 1:
     Chain 1: Gradient evaluation took 0 seconds
     Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0 seconds.
     Chain 1: Adjust your expectations accordingly!
     Chain 1:
     Chain 1:
     Chain 1: Iteration: 1 / 5000 [ 0%] (Warmup)
     Chain 1: Iteration: 500 / 5000 [ 10%] (Warmup)
     Chain 1: Iteration: 1000 / 5000 [ 20%] (Warmup)
     Chain 1: Iteration: 1500 / 5000 [ 30%] (Warmup)
     Chain 1: Iteration: 2000 / 5000 [ 40%] (Warmup)
     Chain 1: Iteration: 2500 / 5000 [ 50%] (Warmup)
     Chain 1: Iteration: 2501 / 5000 [ 50%] (Sampling)
     Chain 1: Iteration: 3000 / 5000 [ 60%] (Sampling)
    
     SAMPLING FOR MODEL 'continuous' NOW (CHAIN 2).
     Chain 2:
     Chain 2: Gradient evaluation took 0 seconds
     Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0 seconds.
     Chain 2: Adjust your expectations accordingly!
     Chain 2:
     Chain 2:
     Chain 2: Iteration: 1 / 5000 [ 0%] (Warmup)
     Chain 1: Iteration: 3500 / 5000 [ 70%] (Sampling)
     Chain 2: Iteration: 500 / 5000 [ 10%] (Warmup)
     Chain 2: Iteration: 1000 / 5000 [ 20%] (Warmup)
     Chain 2: Iteration: 1500 / 5000 [ 30%] (Warmup)
     Chain 1: Iteration: 4000 / 5000 [ 80%] (Sampling)
     Chain 2: Iteration: 2000 / 5000 [ 40%] (Warmup)
     Chain 2: Iteration: 2500 / 5000 [ 50%] (Warmup)
     Chain 2: Iteration: 2501 / 5000 [ 50%] (Sampling)
     Chain 1: Iteration: 4500 / 5000 [ 90%] (Sampling)
     Chain 2: Iteration: 3000 / 5000 [ 60%] (Sampling)
     Chain 2: Iteration: 3500 / 5000 [ 70%] (Sampling)
     Chain 1: Iteration: 5000 / 5000 [100%] (Sampling)
     Chain 1:
     Chain 1: Elapsed Time: 0.687 seconds (Warm-up)
     Chain 1: 1.185 seconds (Sampling)
     Chain 1: 1.872 seconds (Total)
     Chain 1:
     Chain 2: Iteration: 4000 / 5000 [ 80%] (Sampling)
     Chain 2: Iteration: 4500 / 5000 [ 90%] (Sampling)
     Chain 2: Iteration: 5000 / 5000 [100%] (Sampling)
     Chain 2:
     Chain 2: Elapsed Time: 0.577 seconds (Warm-up)
     Chain 2: 0.64 seconds (Sampling)
     Chain 2: 1.217 seconds (Total)
     Chain 2:
     Iteration: 1
     Iteration: 2
     Iteration: 3
     Iteration: 4
     == testthat results ===========================================================
     [ OK: 64 | SKIPPED: 13 | WARNINGS: 0 | FAILED: 2 ]
     1. Error: stan_bridge_sampler (@test-stan_bridge_sampler_basic.R#56)
     2. Error: stan_bridge_sampler (@test-stan_bridge_sampler_basic.R#56)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.0-0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘rstanarm’
Flavor: r-patched-linux-x86_64

Version: 1.0-0
Check: tests
Result: ERROR
     Running 'testthat.R' [148s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > Sys.setenv("R_TESTS" = "")
     > library(testthat)
     >
     > test_check("bridgesampling")
     Loading required package: bridgesampling
     Median of 10 bridge sampling estimates
     of the log marginal likelihood: 4293.156
     Range of estimates: 4290.976 to 4294.028
     Interquartile range: 1.62594
     Method: normal
     make cmd is
     make -f "D:/RCompile/recent/R-40~1.2/etc/x64/Makeconf" -f "D:/RCompile/recent/R-40~1.2/etc/x64/Makevars.site" -f "D:/RCompile/recent/R-40~1.2/share/make/winshlib.mk" CXX='$(CXX14) $(CXX14STD)' CXXFLAGS='$(CXX14FLAGS)' CXXPICFLAGS='$(CXX14PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX14LDFLAGS)' SHLIB_LD='$(SHLIB_CXX14LD)' SHLIB="file1aef476a41b88.dll" WIN=64 TCLBIN=64 OBJECTS="file1aef476a41b88.o"
    
     make would use
     make[1]: Entering directory '/d/temp/RtmpY7yZJY'
     if test "zfile1aef476a41b88.o" != "z"; then \
     if test -e "file1aef476a41b88-win.def"; then \
     echo d:/Compiler/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o file1aef476a41b88.dll file1aef476a41b88-win.def file1aef476a41b88.o -L"d:/Compiler/gcc-4.9.3/local330/lib/x64" -L"d:/Compiler/gcc-4.9.3/local330/lib" -L"D:/RCompile/recent/R-40~1.2/bin/x64" -lR ; \
     d:/Compiler/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o file1aef476a41b88.dll file1aef476a41b88-win.def file1aef476a41b88.o -L"d:/Compiler/gcc-4.9.3/local330/lib/x64" -L"d:/Compiler/gcc-4.9.3/local330/lib" -L"D:/RCompile/recent/R-40~1.2/bin/x64" -lR ; \
     else \
     echo EXPORTS > tmp.def; \
     d:/Compiler/rtools40/mingw64/bin/nm file1aef476a41b88.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
     echo d:/Compiler/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o file1aef476a41b88.dll tmp.def file1aef476a41b88.o -L"d:/Compiler/gcc-4.9.3/local330/lib/x64" -L"d:/Compiler/gcc-4.9.3/local330/lib" -L"D:/RCompile/recent/R-40~1.2/bin/x64" -lR ; \
     d:/Compiler/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o file1aef476a41b88.dll tmp.def file1aef476a41b88.o -L"d:/Compiler/gcc-4.9.3/local330/lib/x64" -L"d:/Compiler/gcc-4.9.3/local330/lib" -L"D:/RCompile/recent/R-40~1.2/bin/x64" -lR ; \
     rm -f tmp.def; \
     fi \
     fi
     make[1]: Leaving directory '/d/temp/RtmpY7yZJY'
     -- 1. Error: stan_bridge_sampler ----------------------------------------------
     D:/Compiler/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: file1aef476a41b88.o:file1aef476a41b88.cpp:(.text$_ZN3tbb8internal26task_scheduler_observer_v3D1Ev[_ZN3tbb8internal26task_scheduler_observer_v3D1Ev]+0x14): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'D:/Compiler/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: file1aef476a41b88.o:file1aef476a41b88.cpp:(.text$_ZN3tbb8internal26task_scheduler_observer_v3D0Ev[_ZN3tbb8internal26task_scheduler_observer_v3D0Ev]+0x1c): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'D:/Compiler/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: file1aef476a41b88.o:file1aef476a41b88.cpp:(.text$_ZN4stan4math16ad_tape_observerD1Ev[_ZN4stan4math16ad_tape_observerD1Ev]+0x15): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'D:/Compiler/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: file1aef476a41b88.o:file1aef476a41b88.cpp:(.text$_ZN4stan4math16ad_tape_observerD1Ev[_ZN4stan4math16ad_tape_observerD1Ev]+0x47): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'D:/Compiler/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: file1aef476a41b88.o:file1aef476a41b88.cpp:(.text$_ZN4stan4math16ad_tape_observerD0Ev[_ZN4stan4math16ad_tape_observerD0Ev]+0x15): more undefined references to `tbb::internal::task_scheduler_observer_v3::observe(bool)' followcollect2.exe: error: ld returned 1 exit status
     Backtrace:
     1. base::suppressMessages(...)
     3. rstan::stan_model(model_code = stancodeH0, model_name = "stanmodel")
     4. rstan:::cxxfunctionplus(...)
     8. inline::cxxfunction(...)
     9. inline:::compileCode(f, code, language = language, verbose = verbose)
    
     -- 2. Error: stan_bridge_sampler ----------------------------------------------
     invalid connection
     Backtrace:
     1. base::suppressMessages(...)
     3. rstan::stan_model(model_code = stancodeH0, model_name = "stanmodel")
     4. rstan:::cxxfunctionplus(...)
     5. base::sink(type = "output")
    
     starting worker pid=190500 on localhost:11391 at 11:30:20.602
     starting worker pid=202204 on localhost:11391 at 11:30:20.976
    
     SAMPLING FOR MODEL 'continuous' NOW (CHAIN 1).
     Chain 1:
     Chain 1: Gradient evaluation took 0 seconds
     Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0 seconds.
     Chain 1: Adjust your expectations accordingly!
     Chain 1:
     Chain 1:
     Chain 1: Iteration: 1 / 5000 [ 0%] (Warmup)
     Chain 1: Iteration: 500 / 5000 [ 10%] (Warmup)
     Chain 1: Iteration: 1000 / 5000 [ 20%] (Warmup)
     Chain 1: Iteration: 1500 / 5000 [ 30%] (Warmup)
     Chain 1: Iteration: 2000 / 5000 [ 40%] (Warmup)
     Chain 1: Iteration: 2500 / 5000 [ 50%] (Warmup)
     Chain 1: Iteration: 2501 / 5000 [ 50%] (Sampling)
     Chain 1: Iteration: 3000 / 5000 [ 60%] (Sampling)
     Chain 1: Iteration: 3500 / 5000 [ 70%] (Sampling)
     Chain 1: Iteration: 4000 / 5000 [ 80%] (Sampling)
     Chain 1: Iteration: 4500 / 5000 [ 90%] (Sampling)
     Chain 1: Iteration: 5000 / 5000 [100%] (Sampling)
     Chain 1:
     Chain 1: Elapsed Time: 0.405 seconds (Warm-up)
     Chain 1: 0.499 seconds (Sampling)
     Chain 1: 0.904 seconds (Total)
     Chain 1:
    
     SAMPLING FOR MODEL 'continuous' NOW (CHAIN 2).
     Chain 2:
     Chain 2: Gradient evaluation took 0 seconds
     Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0 seconds.
     Chain 2: Adjust your expectations accordingly!
     Chain 2:
     Chain 2:
     Chain 2: Iteration: 1 / 5000 [ 0%] (Warmup)
     Chain 2: Iteration: 500 / 5000 [ 10%] (Warmup)
     Chain 2: Iteration: 1000 / 5000 [ 20%] (Warmup)
     Chain 2: Iteration: 1500 / 5000 [ 30%] (Warmup)
     Chain 2: Iteration: 2000 / 5000 [ 40%] (Warmup)
     Chain 2: Iteration: 2500 / 5000 [ 50%] (Warmup)
     Chain 2: Iteration: 2501 / 5000 [ 50%] (Sampling)
     Chain 2: Iteration: 3000 / 5000 [ 60%] (Sampling)
     Chain 2: Iteration: 3500 / 5000 [ 70%] (Sampling)
     Chain 2: Iteration: 4000 / 5000 [ 80%] (Sampling)
     Chain 2: Iteration: 4500 / 5000 [ 90%] (Sampling)
     Chain 2: Iteration: 5000 / 5000 [100%] (Sampling)
     Chain 2:
     Chain 2: Elapsed Time: 0.406 seconds (Warm-up)
     Chain 2: 0.561 seconds (Sampling)
     Chain 2: 0.967 seconds (Total)
     Chain 2:
     Iteration: 1
     Iteration: 2
     Iteration: 3
     Iteration: 4
     Iteration: 5
     starting worker pid=169832 on localhost:11391 at 11:30:41.762
     starting worker pid=192384 on localhost:11391 at 11:30:42.120
    
     SAMPLING FOR MODEL 'continuous' NOW (CHAIN 1).
     Chain 1:
     Chain 1: Gradient evaluation took 0 seconds
     Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0 seconds.
     Chain 1: Adjust your expectations accordingly!
     Chain 1:
     Chain 1:
     Chain 1: Iteration: 1 / 5000 [ 0%] (Warmup)
     Chain 1: Iteration: 500 / 5000 [ 10%] (Warmup)
     Chain 1: Iteration: 1000 / 5000 [ 20%] (Warmup)
     Chain 1: Iteration: 1500 / 5000 [ 30%] (Warmup)
     Chain 1: Iteration: 2000 / 5000 [ 40%] (Warmup)
     Chain 1: Iteration: 2500 / 5000 [ 50%] (Warmup)
     Chain 1: Iteration: 2501 / 5000 [ 50%] (Sampling)
     Chain 1: Iteration: 3000 / 5000 [ 60%] (Sampling)
    
     SAMPLING FOR MODEL 'continuous' NOW (CHAIN 2).
     Chain 2:
     Chain 2: Gradient evaluation took 0 seconds
     Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0 seconds.
     Chain 2: Adjust your expectations accordingly!
     Chain 2:
     Chain 2:
     Chain 2: Iteration: 1 / 5000 [ 0%] (Warmup)
     Chain 1: Iteration: 3500 / 5000 [ 70%] (Sampling)
     Chain 2: Iteration: 500 / 5000 [ 10%] (Warmup)
     Chain 1: Iteration: 4000 / 5000 [ 80%] (Sampling)
     Chain 2: Iteration: 1000 / 5000 [ 20%] (Warmup)
     Chain 2: Iteration: 1500 / 5000 [ 30%] (Warmup)
     Chain 1: Iteration: 4500 / 5000 [ 90%] (Sampling)
     Chain 2: Iteration: 2000 / 5000 [ 40%] (Warmup)
     Chain 2: Iteration: 2500 / 5000 [ 50%] (Warmup)
     Chain 2: Iteration: 2501 / 5000 [ 50%] (Sampling)
     Chain 1: Iteration: 5000 / 5000 [100%] (Sampling)
     Chain 1:
     Chain 1: Elapsed Time: 0.688 seconds (Warm-up)
     Chain 1: 1.295 seconds (Sampling)
     Chain 1: 1.983 seconds (Total)
     Chain 1:
     Chain 2: Iteration: 3000 / 5000 [ 60%] (Sampling)
     Chain 2: Iteration: 3500 / 5000 [ 70%] (Sampling)
     Chain 2: Iteration: 4000 / 5000 [ 80%] (Sampling)
     Chain 2: Iteration: 4500 / 5000 [ 90%] (Sampling)
     Chain 2: Iteration: 5000 / 5000 [100%] (Sampling)
     Chain 2:
     Chain 2: Elapsed Time: 0.702 seconds (Warm-up)
     Chain 2: 0.905 seconds (Sampling)
     Chain 2: 1.607 seconds (Total)
     Chain 2:
     Iteration: 1
     Iteration: 2
     Iteration: 3
     Iteration: 4
     == testthat results ===========================================================
     [ OK: 64 | SKIPPED: 13 | WARNINGS: 0 | FAILED: 2 ]
     1. Error: stan_bridge_sampler
     2. Error: stan_bridge_sampler
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-release-windows-ix86+x86_64

Version: 1.0-0
Check: tests
Result: ERROR
     Running 'testthat.R' [151s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > Sys.setenv("R_TESTS" = "")
     > library(testthat)
     >
     > test_check("bridgesampling")
     Loading required package: bridgesampling
     Median of 10 bridge sampling estimates
     of the log marginal likelihood: 4293.156
     Range of estimates: 4290.976 to 4294.028
     Interquartile range: 1.62594
     Method: normal
     make cmd is
     make -f "D:/RCompile/recent/R-36~1.3/etc/x64/Makeconf" -f "D:/RCompile/recent/R-36~1.3/etc/x64/Makevars.site" -f "D:/RCompile/recent/R-36~1.3/share/make/winshlib.mk" CXX='$(CXX11) $(CXX11STD)' CXXFLAGS='$(CXX11FLAGS)' CXXPICFLAGS='$(CXX11PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX11LDFLAGS)' SHLIB_LD='$(SHLIB_CXX11LD)' SHLIB="file2e61059bb6435.dll" WIN=64 TCLBIN=64 OBJECTS="file2e61059bb6435.o"
    
     make would use
     make[1]: Entering directory `/cygdrive/d/temp/Rtmpqcr6H2'
     if test "zfile2e61059bb6435.o" != "z"; then \
     if test -e "file2e61059bb6435-win.def"; then \
     echo d:/Compiler/gcc-4.9.3/mingw_64/bin/g++ -m64 -shared -s -static-libgcc -o file2e61059bb6435.dll file2e61059bb6435-win.def file2e61059bb6435.o -L"d:/Compiler/gcc-4.9.3/local330/lib/x64" -L"d:/Compiler/gcc-4.9.3/local330/lib" -L"D:/RCompile/recent/R-36~1.3/bin/x64" -lR ; \
     d:/Compiler/gcc-4.9.3/mingw_64/bin/g++ -m64 -shared -s -static-libgcc -o file2e61059bb6435.dll file2e61059bb6435-win.def file2e61059bb6435.o -L"d:/Compiler/gcc-4.9.3/local330/lib/x64" -L"d:/Compiler/gcc-4.9.3/local330/lib" -L"D:/RCompile/recent/R-36~1.3/bin/x64" -lR ; \
     else \
     echo EXPORTS > tmp.def; \
     d:/Compiler/gcc-4.9.3/mingw_64/bin/nm file2e61059bb6435.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
     echo d:/Compiler/gcc-4.9.3/mingw_64/bin/g++ -m64 -shared -s -static-libgcc -o file2e61059bb6435.dll tmp.def file2e61059bb6435.o -L"d:/Compiler/gcc-4.9.3/local330/lib/x64" -L"d:/Compiler/gcc-4.9.3/local330/lib" -L"D:/RCompile/recent/R-36~1.3/bin/x64" -lR ; \
     d:/Compiler/gcc-4.9.3/mingw_64/bin/g++ -m64 -shared -s -static-libgcc -o file2e61059bb6435.dll tmp.def file2e61059bb6435.o -L"d:/Compiler/gcc-4.9.3/local330/lib/x64" -L"d:/Compiler/gcc-4.9.3/local330/lib" -L"D:/RCompile/recent/R-36~1.3/bin/x64" -lR ; \
     rm -f tmp.def; \
     fi \
     fi
     make[1]: Leaving directory `/cygdrive/d/temp/Rtmpqcr6H2'
     -- 1. Error: stan_bridge_sampler ----------------------------------------------
     file2e61059bb6435.o:file2e61059bb6435.cpp:(.text$_ZN3tbb8internal26task_scheduler_observer_v3D1Ev[_ZN3tbb8internal26task_scheduler_observer_v3D1Ev]+0x14): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'file2e61059bb6435.o:file2e61059bb6435.cpp:(.text$_ZN3tbb8internal26task_scheduler_observer_v3D0Ev[_ZN3tbb8internal26task_scheduler_observer_v3D0Ev]+0x1c): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'file2e61059bb6435.o:file2e61059bb6435.cpp:(.text$_ZN4stan4math16ad_tape_observerD1Ev[_ZN4stan4math16ad_tape_observerD1Ev]+0x15): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'file2e61059bb6435.o:file2e61059bb6435.cpp:(.text$_ZN4stan4math16ad_tape_observerD1Ev[_ZN4stan4math16ad_tape_observerD1Ev]+0x47): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'file2e61059bb6435.o:file2e61059bb6435.cpp:(.text$_ZN4stan4math16ad_tape_observerD0Ev[_ZN4stan4math16ad_tape_observerD0Ev]+0x15): more undefined references to `tbb::internal::task_scheduler_observer_v3::observe(bool)' followcollect2.exe: error: ld returned 1 exit status
     Backtrace:
     1. base::suppressMessages(...)
     3. rstan::stan_model(model_code = stancodeH0, model_name = "stanmodel")
     4. rstan:::cxxfunctionplus(...)
     8. inline::cxxfunction(...)
     9. inline:::compileCode(f, code, language = language, verbose = verbose)
    
     -- 2. Error: stan_bridge_sampler ----------------------------------------------
     invalid connection
     Backtrace:
     1. base::suppressMessages(...)
     3. rstan::stan_model(model_code = stancodeH0, model_name = "stanmodel")
     4. rstan:::cxxfunctionplus(...)
     5. base::sink(type = "output")
    
     starting worker pid=195916 on localhost:11674 at 07:32:10.831
     starting worker pid=23692 on localhost:11674 at 07:32:11.159
    
     SAMPLING FOR MODEL 'continuous' NOW (CHAIN 1).
     Chain 1:
     Chain 1: Gradient evaluation took 0 seconds
     Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0 seconds.
     Chain 1: Adjust your expectations accordingly!
     Chain 1:
     Chain 1:
     Chain 1: Iteration: 1 / 5000 [ 0%] (Warmup)
     Chain 1: Iteration: 500 / 5000 [ 10%] (Warmup)
     Chain 1: Iteration: 1000 / 5000 [ 20%] (Warmup)
     Chain 1: Iteration: 1500 / 5000 [ 30%] (Warmup)
     Chain 1: Iteration: 2000 / 5000 [ 40%] (Warmup)
     Chain 1: Iteration: 2500 / 5000 [ 50%] (Warmup)
     Chain 1: Iteration: 2501 / 5000 [ 50%] (Sampling)
     Chain 1: Iteration: 3000 / 5000 [ 60%] (Sampling)
    
     SAMPLING FOR MODEL 'continuous' NOW (CHAIN 2).
     Chain 2:
     Chain 2: Gradient evaluation took 0 seconds
     Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0 seconds.
     Chain 2: Adjust your expectations accordingly!
     Chain 2:
     Chain 2:
     Chain 2: Iteration: 1 / 5000 [ 0%] (Warmup)
     Chain 1: Iteration: 3500 / 5000 [ 70%] (Sampling)
     Chain 2: Iteration: 500 / 5000 [ 10%] (Warmup)
     Chain 2: Iteration: 1000 / 5000 [ 20%] (Warmup)
     Chain 2: Iteration: 1500 / 5000 [ 30%] (Warmup)
     Chain 2: Iteration: 2000 / 5000 [ 40%] (Warmup)
     Chain 1: Iteration: 4000 / 5000 [ 80%] (Sampling)
     Chain 2: Iteration: 2500 / 5000 [ 50%] (Warmup)
     Chain 2: Iteration: 2501 / 5000 [ 50%] (Sampling)
     Chain 1: Iteration: 4500 / 5000 [ 90%] (Sampling)
     Chain 2: Iteration: 3000 / 5000 [ 60%] (Sampling)
     Chain 1: Iteration: 5000 / 5000 [100%] (Sampling)
     Chain 1:
     Chain 1: Elapsed Time: 0.468 seconds (Warm-up)
     Chain 1: 1.575 seconds (Sampling)
     Chain 1: 2.043 seconds (Total)
     Chain 1:
     Chain 2: Iteration: 3500 / 5000 [ 70%] (Sampling)
     Chain 2: Iteration: 4000 / 5000 [ 80%] (Sampling)
     Chain 2: Iteration: 4500 / 5000 [ 90%] (Sampling)
     Chain 2: Iteration: 5000 / 5000 [100%] (Sampling)
     Chain 2:
     Chain 2: Elapsed Time: 0.452 seconds (Warm-up)
     Chain 2: 1.451 seconds (Sampling)
     Chain 2: 1.903 seconds (Total)
     Chain 2:
     Iteration: 1
     Iteration: 2
     Iteration: 3
     Iteration: 4
     Iteration: 5
     starting worker pid=85164 on localhost:11674 at 07:32:31.672
     starting worker pid=131056 on localhost:11674 at 07:32:32.030
    
     SAMPLING FOR MODEL 'continuous' NOW (CHAIN 1).
     Chain 1:
     Chain 1: Gradient evaluation took 0 seconds
     Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0 seconds.
     Chain 1: Adjust your expectations accordingly!
     Chain 1:
     Chain 1:
     Chain 1: Iteration: 1 / 5000 [ 0%] (Warmup)
     Chain 1: Iteration: 500 / 5000 [ 10%] (Warmup)
     Chain 1: Iteration: 1000 / 5000 [ 20%] (Warmup)
     Chain 1: Iteration: 1500 / 5000 [ 30%] (Warmup)
     Chain 1: Iteration: 2000 / 5000 [ 40%] (Warmup)
     Chain 1: Iteration: 2500 / 5000 [ 50%] (Warmup)
     Chain 1: Iteration: 2501 / 5000 [ 50%] (Sampling)
     Chain 1: Iteration: 3000 / 5000 [ 60%] (Sampling)
    
     SAMPLING FOR MODEL 'continuous' NOW (CHAIN 2).
     Chain 2:
     Chain 2: Gradient evaluation took 0 seconds
     Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0 seconds.
     Chain 2: Adjust your expectations accordingly!
     Chain 2:
     Chain 2:
     Chain 2: Iteration: 1 / 5000 [ 0%] (Warmup)
     Chain 2: Iteration: 500 / 5000 [ 10%] (Warmup)
     Chain 2: Iteration: 1000 / 5000 [ 20%] (Warmup)
     Chain 1: Iteration: 3500 / 5000 [ 70%] (Sampling)
     Chain 2: Iteration: 1500 / 5000 [ 30%] (Warmup)
     Chain 2: Iteration: 2000 / 5000 [ 40%] (Warmup)
     Chain 2: Iteration: 2500 / 5000 [ 50%] (Warmup)
     Chain 2: Iteration: 2501 / 5000 [ 50%] (Sampling)
     Chain 1: Iteration: 4000 / 5000 [ 80%] (Sampling)
     Chain 2: Iteration: 3000 / 5000 [ 60%] (Sampling)
     Chain 1: Iteration: 4500 / 5000 [ 90%] (Sampling)
     Chain 2: Iteration: 3500 / 5000 [ 70%] (Sampling)
     Chain 1: Iteration: 5000 / 5000 [100%] (Sampling)
     Chain 1:
     Chain 1: Elapsed Time: 0.749 seconds (Warm-up)
     Chain 1: 2.074 seconds (Sampling)
     Chain 1: 2.823 seconds (Total)
     Chain 1:
     Chain 2: Iteration: 4000 / 5000 [ 80%] (Sampling)
     Chain 2: Iteration: 4500 / 5000 [ 90%] (Sampling)
     Chain 2: Iteration: 5000 / 5000 [100%] (Sampling)
     Chain 2:
     Chain 2: Elapsed Time: 0.78 seconds (Warm-up)
     Chain 2: 1.934 seconds (Sampling)
     Chain 2: 2.714 seconds (Total)
     Chain 2:
     Iteration: 1
     Iteration: 2
     Iteration: 3
     Iteration: 4
     == testthat results ===========================================================
     [ OK: 64 | SKIPPED: 13 | WARNINGS: 0 | FAILED: 2 ]
     1. Error: stan_bridge_sampler
     2. Error: stan_bridge_sampler
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64