CRAN Package Check Results for Package CNVScope

Last updated on 2020-11-30 03:47:37 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.1.8 49.14 597.95 647.09 WARN
r-devel-linux-x86_64-debian-gcc 3.1.8 41.48 461.24 502.72 WARN
r-devel-linux-x86_64-fedora-clang 3.3.7 857.68 OK
r-devel-linux-x86_64-fedora-gcc 3.1.8 461.75 WARN
r-devel-windows-ix86+x86_64 3.1.8 137.00 662.00 799.00 OK
r-patched-linux-x86_64 3.1.8 45.19 570.80 615.99 WARN
r-patched-solaris-x86 3.3.7 1015.40 NOTE
r-release-linux-x86_64 3.1.8 45.65 564.72 610.37 WARN
r-release-macos-x86_64 3.1.8 ERROR
r-release-windows-ix86+x86_64 3.1.8 104.00 506.00 610.00 OK
r-oldrel-macos-x86_64 3.3.7 ERROR
r-oldrel-windows-ix86+x86_64 3.1.8 104.00 560.00 664.00 OK

Check Details

Version: 3.1.8
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'spatialfil'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 3.1.8
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building 'additonal_examples.Rmd' using rmarkdown
    Quitting from lines 122-139 (additonal_examples.Rmd)
    Error: processing vignette 'additonal_examples.Rmd' failed with diagnostics:
    object 'chr_7_probdist' not found
    --- failed re-building 'additonal_examples.Rmd'
    
    --- re-building 'create_input_matrix.Rmd' using rmarkdown
    --- finished re-building 'create_input_matrix.Rmd'
    
    --- re-building 'create_output_matrix.Rmd' using rmarkdown
    Loading required package: ggplot2
    --- finished re-building 'create_output_matrix.Rmd'
    
    --- re-building 'power_analysis.Rmd' using rmarkdown
    --- finished re-building 'power_analysis.Rmd'
    
    SUMMARY: processing the following file failed:
     'additonal_examples.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 3.1.8
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘additonal_examples.Rmd’ using rmarkdown
    Quitting from lines 122-139 (additonal_examples.Rmd)
    Error: processing vignette 'additonal_examples.Rmd' failed with diagnostics:
    object 'chr_7_probdist' not found
    --- failed re-building ‘additonal_examples.Rmd’
    
    --- re-building ‘create_input_matrix.Rmd’ using rmarkdown
    --- finished re-building ‘create_input_matrix.Rmd’
    
    --- re-building ‘create_output_matrix.Rmd’ using rmarkdown
    Loading required package: ggplot2
    --- finished re-building ‘create_output_matrix.Rmd’
    
    --- re-building ‘power_analysis.Rmd’ using rmarkdown
    --- finished re-building ‘power_analysis.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘additonal_examples.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 3.3.7
Check: installed package size
Result: NOTE
     installed size is 5.2Mb
     sub-directories of 1Mb or more:
     doc 3.1Mb
     extdata 1.8Mb
Flavor: r-patched-solaris-x86

Version: 3.1.8
Check: package dependencies
Result: ERROR
    Package required but not available: ‘GenomicInteractions’
    
    Package suggested but not available for checking: ‘InteractionSet’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-macos-x86_64

Version: 3.3.7
Check: package dependencies
Result: ERROR
    Package required but not available: ‘GenomicInteractions’
    
    Packages suggested but not available for checking:
     'InteractionSet', 'BSgenome.Hsapiens.UCSC.hg19'
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-oldrel-macos-x86_64